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Custom charts are automatically saved when you save your project. This will save which results are in your custom chart along with the transforms you have applied, the chart type, and any other options you have configured (eg. short header in Tables). However, results themselves are not saved unless you choose to save the run(s) that generated the results. When you next open your project, the custom chart will be empty until a result is generated that exactly matches the name of a result used in the custom chart, ie. the scenario name and run number have to match, so you need to run the scenarios in the same order. If results from Latest Run are used to generate a custom chart, it will be populated as soon as you run any scenario. Therefore, if you want to return to an analysis in a custom chart after closing a project, it is best to use either results from Latest Run or to save the run in the project.
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